Pseudomonas aeruginosa M18, PAM18_4360

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0015628 protein secretion by the type II secretion system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00885
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0015627 type II protein secretion system complex
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00885
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG paf03070 Bacterial secretion system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR00885 Bacterial general secretion pathway protein H signature IPR002416 Type II secretion system protein GspH 19 33 4.7E-6
PRINTS PR00885 Bacterial general secretion pathway protein H signature IPR002416 Type II secretion system protein GspH 4 18 4.7E-6
NCBIfam TIGR02532 JCVI: prepilin-type N-terminal cleavage/methylation domain IPR012902 Prokaryotic N-terminal methylation site 6 28 8.7E-8
Gene3D G3DSA:3.55.40.10 minor pseudopilin epsh domain - - 39 146 1.3E-5
Pfam PF12019 Type II transport protein GspH IPR022346 General secretion pathway, GspH 44 137 9.7E-5
PRINTS PR00885 Bacterial general secretion pathway protein H signature IPR002416 Type II secretion system protein GspH 124 139 4.7E-6
Pfam PF07963 Prokaryotic N-terminal methylation motif IPR012902 Prokaryotic N-terminal methylation site 3 28 6.2E-10
SUPERFAMILY SSF54523 Pili subunits IPR045584 Pilin-like 9 81 8.63E-11
NCBIfam TIGR01708 JCVI: type II secretion system minor pseudopilin GspH IPR002416 Type II secretion system protein GspH 6 148 9.4E-33

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.