Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Biological Process | GO:0006355 | regulation of transcription, DNA-templated |
Inferred from Sequence Model
Term mapped from: InterPro:PR00039
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0003700 | DNA-binding transcription factor activity |
Inferred from Sequence Model
Term mapped from: InterPro:PR00039
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
|
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
Gene3D | G3DSA:3.40.190.10 | - | - | - | 161 | 263 | 2.2E-46 |
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 20 | 31 | 6.8E-11 |
Gene3D | G3DSA:1.10.10.10 | - | IPR036388 | Winged helix-like DNA-binding domain superfamily | 2 | 84 | 4.8E-26 |
NCBIfam | TIGR03418 | JCVI: putative choline sulfate-utilization transcription factor | IPR017786 | Transcription factor, choline sulphate-utilisation, putative | 5 | 293 | 0.0 |
SUPERFAMILY | SSF53850 | Periplasmic binding protein-like II | - | - | 92 | 295 | 2.9E-35 |
Pfam | PF00126 | Bacterial regulatory helix-turn-helix protein, lysR family | IPR000847 | Transcription regulator HTH, LysR | 5 | 64 | 6.0E-24 |
CDD | cd08432 | PBP2_GcdR_TrpI_HvrB_AmpR_like | - | - | 92 | 290 | 4.10631E-56 |
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 31 | 41 | 6.8E-11 |
Pfam | PF03466 | LysR substrate binding domain | IPR005119 | LysR, substrate-binding | 88 | 294 | 1.4E-34 |
Gene3D | G3DSA:3.40.190.10 | - | - | - | 98 | 290 | 2.2E-46 |
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 41 | 52 | 6.8E-11 |
PANTHER | PTHR30537 | HTH-TYPE TRANSCRIPTIONAL REGULATOR | - | - | 5 | 294 | 5.4E-72 |
FunFam | G3DSA:1.10.10.10:FF:000001 | LysR family transcriptional regulator | - | - | 3 | 88 | 3.7E-25 |
SUPERFAMILY | SSF46785 | Winged helix DNA-binding domain | IPR036390 | Winged helix DNA-binding domain superfamily | 4 | 81 | 3.1E-23 |