Pseudomonas aeruginosa DK2, PADK2_02570

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003824 catalytic activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SFLDS00029
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0051539 4 iron, 4 sulfur cluster binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SFLDF00393
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0051536 iron-sulfur cluster binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SFLDS00029
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
FunFam G3DSA:3.20.20.70:FF:000188 Mycofactocin radical SAM maturase MftC - - 22 331 2.0E-101
Gene3D G3DSA:3.20.20.70 Aldolase class I IPR013785 Aldolase-type TIM barrel 22 248 3.1E-47
CDD cd01335 Radical_SAM - - 31 214 3.08229E-25
Pfam PF04055 Radical SAM superfamily IPR007197 Radical SAM 33 187 1.4E-25
SFLD SFLDF00393 heme D1 biosynthesis (NirJ-like) IPR023992 Pre-heme d1 synthase NirJ 1 383 0.0
PIRSF PIRSF037420 PqqE IPR017200 Coenzyme PQQ synthesis protein E-like 13 386 0.0
SFLD SFLDS00029 Radical SAM IPR007197 Radical SAM 1 383 0.0
NCBIfam TIGR04051 JCVI: heme d1 biosynthesis radical SAM protein NirJ IPR023992 Pre-heme d1 synthase NirJ 26 378 0.0
Pfam PF13353 4Fe-4S single cluster domain - - 28 138 1.7E-8
SMART SM00729 MiaB IPR006638 Elp3/MiaA/NifB-like, radical SAM core domain 27 230 5.8E-4
SUPERFAMILY SSF102114 Radical SAM enzymes - - 23 351 2.09E-68
PANTHER PTHR11228 RADICAL SAM DOMAIN PROTEIN - - 25 370 5.7E-84

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.