Pseudomonas aeruginosa DK2, PADK2_18595
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0005515 | protein binding |
Inferred from Sequence Model
Term mapped from: InterPro:PF08447
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Biological Process | GO:0007165 | signal transduction |
Inferred from Sequence Model
Term mapped from: InterPro:SM00283
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Cellular Component | GO:0016020 | membrane |
Inferred from Sequence Model
Term mapped from: InterPro:SM00283
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
|
|
Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| KEGG | pdk02020 | Two-component system | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | pdk02030 | Bacterial chemotaxis | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| CDD | cd00130 | PAS | IPR000014 | PAS domain | 152 | 254 | 6.25099E-12 |
| Gene3D | G3DSA:3.30.450.20 | PAS domain | - | - | 4 | 127 | 6.8E-24 |
| NCBIfam | TIGR00229 | JCVI: PAS domain S-box protein | IPR000014 | PAS domain | 152 | 260 | 8.3E-15 |
| FunFam | G3DSA:3.30.450.20:FF:000103 | Methyl-accepting chemotaxis protein | - | - | 142 | 256 | 6.5E-60 |
| PANTHER | PTHR24422 | CHEMOTAXIS PROTEIN METHYLTRANSFERASE | - | - | 24 | 431 | 2.4E-58 |
| SMART | SM00086 | pac_2 | IPR001610 | PAC motif | 93 | 135 | 0.049 |
| SMART | SM00091 | pas_2 | IPR000014 | PAS domain | 140 | 209 | 9.5 |
| NCBIfam | TIGR00229 | JCVI: PAS domain S-box protein | IPR000014 | PAS domain | 20 | 141 | 7.8E-16 |
| CDD | cd00130 | PAS | IPR000014 | PAS domain | 37 | 132 | 6.15171E-13 |
| SUPERFAMILY | SSF55785 | PYP-like sensor domain (PAS domain) | IPR035965 | PAS domain superfamily | 30 | 132 | 3.91E-26 |
| SUPERFAMILY | SSF55785 | PYP-like sensor domain (PAS domain) | IPR035965 | PAS domain superfamily | 152 | 254 | 3.84E-25 |
| Pfam | PF08447 | PAS fold | IPR013655 | PAS fold-3 | 165 | 250 | 1.8E-15 |
| Pfam | PF00015 | Methyl-accepting chemotaxis protein (MCP) signalling domain | IPR004089 | Methyl-accepting chemotaxis protein (MCP) signalling domain | 275 | 436 | 4.9E-41 |
| SUPERFAMILY | SSF58104 | Methyl-accepting chemotaxis protein (MCP) signaling domain | - | - | 248 | 435 | 1.19E-56 |
| SMART | SM00086 | pac_2 | IPR001610 | PAC motif | 215 | 257 | 1.4E-7 |
| CDD | cd11386 | MCP_signal | - | - | 265 | 437 | 9.00609E-54 |
| Gene3D | G3DSA:1.10.287.950 | - | - | - | 249 | 438 | 2.0E-52 |
| FunFam | G3DSA:3.30.450.20:FF:000103 | Methyl-accepting chemotaxis protein | - | - | 20 | 134 | 1.2E-52 |
| Pfam | PF13426 | PAS domain | IPR000014 | PAS domain | 37 | 132 | 2.4E-15 |
| SMART | SM00091 | pas_2 | IPR000014 | PAS domain | 20 | 88 | 1.8E-4 |
| Gene3D | G3DSA:3.30.450.20 | PAS domain | - | - | 128 | 248 | 1.5E-21 |
| SMART | SM00283 | MA_2 | IPR004089 | Methyl-accepting chemotaxis protein (MCP) signalling domain | 246 | 440 | 3.0E-24 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.