Pseudomonas aeruginosa DK2, PADK2_28840

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016491 oxidoreductase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02819
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pdk01120 Microbial metabolism in diverse environments 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pdk01200 Carbon metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pdk00625 Chloroalkane and chloroalkene degradation 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pdk01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pdk00680 Methane metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain 183 234 1.1E-5
FunFam G3DSA:3.40.50.720:FF:000166 Glutathione-independent formaldehyde dehydrogenase - - 172 338 1.2E-105
SUPERFAMILY SSF51735 NAD(P)-binding Rossmann-fold domains IPR036291 NAD(P)-binding domain superfamily 162 356 1.49E-66
NCBIfam TIGR02819 JCVI: formaldehyde dehydrogenase, glutathione-independent IPR014184 Formaldehyde dehydrogenase, glutathione-independent 2 395 0.0
Pfam PF08240 Alcohol dehydrogenase GroES-like domain IPR013154 Alcohol dehydrogenase-like, N-terminal 35 145 1.8E-26
Gene3D G3DSA:3.90.180.10 - - - 7 381 0.0
Gene3D G3DSA:3.40.50.720 - - - 177 343 0.0
SUPERFAMILY SSF50129 GroES-like IPR011032 GroES-like superfamily 4 187 2.6E-64
PANTHER PTHR42813 ZINC-TYPE ALCOHOL DEHYDROGENASE-LIKE - - 4 393 3.7E-114
CDD cd08282 PFDH_like - - 4 392 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.