Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Molecular Function | GO:0003700 | DNA-binding transcription factor activity |
Inferred from Sequence Model
Term mapped from: InterPro:PF00126
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Biological Process | GO:0006355 | regulation of transcription, DNA-templated |
Inferred from Sequence Model
Term mapped from: InterPro:PF00126
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
|
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
SUPERFAMILY | SSF46785 | Winged helix DNA-binding domain | IPR036390 | Winged helix DNA-binding domain superfamily | 4 | 115 | 8.56E-22 |
SUPERFAMILY | SSF53850 | Periplasmic binding protein-like II | - | - | 94 | 301 | 2.17E-40 |
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 21 | 32 | 7.7E-8 |
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 32 | 42 | 7.7E-8 |
Pfam | PF00126 | Bacterial regulatory helix-turn-helix protein, lysR family | IPR000847 | Transcription regulator HTH, LysR | 6 | 65 | 9.6E-20 |
CDD | cd08412 | PBP2_PAO1_like | - | - | 96 | 294 | 2.34585E-96 |
FunFam | G3DSA:1.10.10.10:FF:000001 | LysR family transcriptional regulator | - | - | 3 | 88 | 6.5E-25 |
Pfam | PF03466 | LysR substrate binding domain | IPR005119 | LysR, substrate-binding | 93 | 298 | 4.3E-43 |
Gene3D | G3DSA:3.40.190.10 | - | - | - | 95 | 290 | 1.8E-56 |
Gene3D | G3DSA:3.40.190.10 | - | - | - | 169 | 271 | 1.8E-56 |
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 42 | 53 | 7.7E-8 |
PANTHER | PTHR30346 | TRANSCRIPTIONAL DUAL REGULATOR HCAR-RELATED | - | - | 5 | 302 | 1.4E-69 |
Gene3D | G3DSA:1.10.10.10 | - | IPR036388 | Winged helix-like DNA-binding domain superfamily | 1 | 87 | 2.5E-28 |