Pseudomonas aeruginosa B136-33, G655_16925
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Pfam | PF05593 | RHS Repeat | IPR031325 | RHS repeat | 1017 | 1049 | 5.8E-8 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 398 | 416 | - |
| Pfam | PF05593 | RHS Repeat | IPR031325 | RHS repeat | 739 | 774 | 4.1E-7 |
| Pfam | PF05593 | RHS Repeat | IPR031325 | RHS repeat | 1238 | 1276 | 2.3E-5 |
| SUPERFAMILY | SSF69304 | Tricorn protease N-terminal domain | - | - | 671 | 975 | 7.19E-10 |
| NCBIfam | TIGR01643 | JCVI: YD repeat (two copies) | IPR006530 | YD repeat | 1261 | 1293 | 3.3E-7 |
| NCBIfam | TIGR01643 | JCVI: YD repeat (two copies) | IPR006530 | YD repeat | 821 | 861 | 8.4E-8 |
| SUPERFAMILY | SSF69304 | Tricorn protease N-terminal domain | - | - | 1088 | 1342 | 3.66E-5 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 1456 | 1476 | - |
| NCBIfam | TIGR03696 | JCVI: RHS repeat-associated core domain | IPR022385 | Rhs repeat-associated core | 1369 | 1445 | 5.8E-28 |
| Pfam | PF05593 | RHS Repeat | IPR031325 | RHS repeat | 1261 | 1290 | 2.1E-5 |
| Pfam | PF03527 | RHS protein | IPR001826 | RHS protein | 1344 | 1377 | 2.1E-13 |
| Gene3D | G3DSA:2.180.10.10 | - | - | - | 790 | 980 | 1.5E-29 |
| NCBIfam | TIGR01643 | JCVI: YD repeat (two copies) | IPR006530 | YD repeat | 863 | 900 | 1.3E-6 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 380 | 432 | - |
| PANTHER | PTHR32305 | - | - | - | 789 | 1446 | 5.8E-41 |
| NCBIfam | TIGR01643 | JCVI: YD repeat (two copies) | IPR006530 | YD repeat | 1037 | 1067 | 3.3E-4 |
| NCBIfam | TIGR01643 | JCVI: YD repeat (two copies) | IPR006530 | YD repeat | 785 | 820 | 4.8E-4 |
| Gene3D | G3DSA:2.180.10.10 | - | - | - | 1066 | 1445 | 1.6E-81 |
| Pfam | PF05593 | RHS Repeat | IPR031325 | RHS repeat | 801 | 836 | 1.7E-7 |
| Pfam | PF05593 | RHS Repeat | IPR031325 | RHS repeat | 870 | 899 | 7.4E-5 |
| NCBIfam | TIGR01643 | JCVI: YD repeat (two copies) | IPR006530 | YD repeat | 739 | 766 | 1.9E-6 |
| Pfam | PF05593 | RHS Repeat | IPR031325 | RHS repeat | 842 | 877 | 1.1E-5 |
| Pfam | PF05593 | RHS Repeat | IPR031325 | RHS repeat | 905 | 942 | 8.4E-5 |
| Gene3D | G3DSA:2.180.10.10 | - | - | - | 542 | 789 | 4.2E-18 |
| Pfam | PF20148 | Domain of unknown function (DUF6531) | IPR045351 | Domain of unknown function DUF6531 | 438 | 510 | 7.6E-19 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.