Pseudomonas aeruginosa B136-33, G655_18810

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0015420 ATPase-coupled vitamin B12 transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01779
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0015889 cobalamin transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01779
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01779
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF07715 TonB-dependent Receptor Plug Domain IPR012910 TonB-dependent receptor, plug domain 43 147 1.2E-29
Gene3D G3DSA:2.40.170.20 - IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily 161 614 1.3E-95
NCBIfam TIGR01779 JCVI: TonB-dependent vitamin B12 receptor IPR010101 TonB-dependent vitamin B12 transporter BtuB 1 615 0.0
Pfam PF00593 TonB dependent receptor IPR000531 TonB-dependent receptor-like, beta-barrel 185 614 8.1E-48
Gene3D G3DSA:2.170.130.10 - IPR037066 TonB-dependent receptor, plug domain superfamily 23 157 4.1E-39
CDD cd01347 ligand_gated_channel - - 48 614 1.71429E-79
SUPERFAMILY SSF56935 Porins - - 31 613 1.4E-121
PANTHER PTHR30069 TONB-DEPENDENT OUTER MEMBRANE RECEPTOR IPR039426 TonB-dependent receptor-like 22 614 1.9E-99

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.