Pseudomonas aeruginosa B136-33, G655_20910

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0030288 outer membrane-bounded periplasmic space
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01096
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0071705 nitrogen compound transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01096
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG psg02010 ABC transporters 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF53850 Periplasmic binding protein-like II - - 1 255 3.03E-70
PANTHER PTHR35936 MEMBRANE-BOUND LYTIC MUREIN TRANSGLYCOSYLASE F - - 5 251 1.8E-50
NCBIfam TIGR01096 JCVI: lysine/arginine/ornithine ABC transporter substrate-binding protein IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter 4 251 4.5E-94
FunFam G3DSA:3.40.190.10:FF:000245 ABC transporter substrate-binding protein - - 111 211 2.1E-66
Gene3D G3DSA:3.40.190.10 - - - 111 211 9.7E-81
SMART SM00062 AABind_6 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF 25 254 2.1E-81
Gene3D G3DSA:3.40.190.10 - - - 27 250 9.7E-81
Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF 26 252 1.3E-65
CDD cd13703 PBP2_HisJ_LAO - - 24 251 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.