Pseudomonas aeruginosa RP73, M062_05420

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0005515 protein binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF141729
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0015473 fimbrial usher porin activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR30451
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009297 pilus assembly
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR30451
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR30451
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:2.60.40.2070 - IPR043142 PapC-like, C-terminal domain superfamily 755 836 8.7E-16
Gene3D G3DSA:3.10.20.410 - IPR037224 PapC, N-terminal domain superfamily 34 162 4.0E-28
Gene3D G3DSA:2.60.40.3110 - - - 271 360 4.4E-32
SUPERFAMILY SSF141729 FimD N-terminal domain-like IPR037224 PapC, N-terminal domain superfamily 58 176 1.44E-28
Pfam PF13953 PapC C-terminal domain IPR025949 PapC-like, C-terminal domain 759 820 1.6E-15
Pfam PF13954 PapC N-terminal domain IPR025885 PapC, N-terminal domain 36 184 8.5E-42
Pfam PF00577 Outer membrane usher protein IPR000015 Outer membrane usher protein 199 749 0.0
PANTHER PTHR30451 OUTER MEMBRANE USHER PROTEIN IPR000015 Outer membrane usher protein 13 835 0.0
FunFam G3DSA:2.60.40.3110:FF:000001 Putative fimbrial outer membrane usher - - 271 360 2.0E-34
Gene3D G3DSA:2.60.40.2610 Outer membrane usher protein FimD, plug domain IPR042186 Outer membrane usher protein FimD, plug domain 664 754 6.6E-28
FunFam G3DSA:2.60.40.2610:FF:000001 Outer membrane fimbrial usher protein - - 664 754 2.1E-30

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.