Pseudomonas entomophila L48, PSEEN2380

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016829 lyase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR12128
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pen01230 Biosynthesis of amino acids 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pen00261 Monobactam biosynthesis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pen01110 Biosynthesis of secondary metabolites 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pen01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pen00300 Lysine biosynthesis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pen01130 Biosynthesis of antibiotics 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pen01120 Microbial metabolism in diverse environments 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR00146 Dihydrodipicolinate synthase signature IPR002220 DapA-like 107 123 7.7E-10
CDD cd00408 DHDPS-like - - 8 290 3.04806E-98
PRINTS PR00146 Dihydrodipicolinate synthase signature IPR002220 DapA-like 132 149 7.7E-10
PRINTS PR00146 Dihydrodipicolinate synthase signature IPR002220 DapA-like 39 60 7.7E-10
Pfam PF00701 Dihydrodipicolinate synthetase family IPR002220 DapA-like 5 290 4.0E-58
Gene3D G3DSA:3.20.20.70 Aldolase class I IPR013785 Aldolase-type TIM barrel 4 294 1.6E-87
PANTHER PTHR12128 DIHYDRODIPICOLINATE SYNTHASE IPR002220 DapA-like 4 290 6.1E-57
SMART SM01130 DHDPS_2 IPR002220 DapA-like 4 294 3.5E-100
PRINTS PR00146 Dihydrodipicolinate synthase signature IPR002220 DapA-like 75 93 7.7E-10
SUPERFAMILY SSF51569 Aldolase - - 1 294 6.07E-85
PIRSF PIRSF001365 DHDPS IPR002220 DapA-like 1 297 1.2E-80

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.