Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Biological Process | GO:0001522 | pseudouridine synthesis |
Inferred from Sequence Model
Term mapped from: InterPro:SSF55120
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0003723 | RNA binding |
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.10.290.10
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0009982 | pseudouridine synthase activity |
Inferred from Sequence Model
Term mapped from: InterPro:SSF55120
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Biological Process | GO:0009451 | RNA modification |
Inferred from Sequence Model
Term mapped from: InterPro:SSF55120
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
|
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
Gene3D | G3DSA:3.30.2350.10 | Pseudouridine synthase | - | - | 66 | 235 | 2.9E-17 |
PANTHER | PTHR47683 | PSEUDOURIDINE SYNTHASE FAMILY PROTEIN-RELATED | - | - | 3 | 232 | 6.2E-28 |
SUPERFAMILY | SSF55174 | Alpha-L RNA-binding motif | - | - | 5 | 49 | 1.83E-10 |
Pfam | PF01479 | S4 domain | IPR002942 | RNA-binding S4 domain | 11 | 45 | 8.1E-6 |
CDD | cd02555 | PSSA_1 | - | - | 60 | 236 | 1.19384E-80 |
SMART | SM00363 | s4_6 | IPR002942 | RNA-binding S4 domain | 5 | 65 | 1.4E-5 |
SUPERFAMILY | SSF55120 | Pseudouridine synthase | IPR020103 | Pseudouridine synthase, catalytic domain superfamily | 106 | 234 | 8.27E-14 |
Gene3D | G3DSA:3.10.290.10 | - | IPR036986 | RNA-binding S4 domain superfamily | 4 | 57 | 5.9E-12 |
CDD | cd00165 | S4 | - | - | 5 | 69 | 4.22844E-7 |