Pseudomonas entomophila L48, PSEEN4159

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.90.1340.10 Phage tail collar domain IPR037053 Phage tail collar domain superfamily 579 643 7.0E-17
SUPERFAMILY SSF88874 Receptor-binding domain of short tail fibre protein gp12 - - 378 555 4.71E-36
Gene3D G3DSA:3.90.1340.10 Phage tail collar domain IPR037053 Phage tail collar domain superfamily 382 446 1.3E-16
Pfam PF12571 Phage tail-collar fibre protein IPR022225 Phage tail fibre protein 6 158 5.1E-46
Pfam PF07484 Phage Tail Collar Domain IPR011083 Phage tail collar domain 387 445 1.8E-13
SUPERFAMILY SSF88874 Receptor-binding domain of short tail fibre protein gp12 - - 576 745 1.2E-35
PANTHER PTHR35191 PROPHAGE SIDE TAIL FIBER PROTEIN HOMOLOG STFQ-RELATED - - 227 512 7.4E-47
Pfam PF07484 Phage Tail Collar Domain IPR011083 Phage tail collar domain 584 642 4.1E-15
Gene3D G3DSA:2.60.40.3940 - - - 804 897 3.8E-11

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.