Pseudomonas stutzeri A1501, PST_0018 (trkA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0005886 plasma membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00335
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008324 cation transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02080
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006813 potassium ion transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF116726
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0015079 potassium ion transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00335
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR00335 TrkA potassium uptake protein signature IPR006036 Potassium uptake protein TrkA 60 70 7.3E-31
FunFam G3DSA:3.40.50.720:FF:000042 Trk system potassium transporter TrkA - - 232 365 6.4E-63
Gene3D G3DSA:3.30.70.1450 - IPR036721 Regulator of K+ conductance, C-terminal domain superfamily 141 231 5.3E-31
Gene3D G3DSA:3.30.70.1450 - IPR036721 Regulator of K+ conductance, C-terminal domain superfamily 366 457 5.2E-36
FunFam G3DSA:3.40.50.720:FF:000027 Trk system potassium transporter TrkA - - 1 140 7.6E-73
Pfam PF02254 TrkA-N domain IPR003148 Regulator of K+ conductance, N-terminal 3 108 8.1E-26
FunFam G3DSA:3.30.70.1450:FF:000001 Trk system potassium transporter TrkA - - 141 231 6.0E-45
Gene3D G3DSA:3.40.50.720 - - - 232 365 5.0E-48
PRINTS PR00335 TrkA potassium uptake protein signature IPR006036 Potassium uptake protein TrkA 49 59 7.3E-31
SUPERFAMILY SSF51735 NAD(P)-binding Rossmann-fold domains IPR036291 NAD(P)-binding domain superfamily 1 150 4.6E-33
SUPERFAMILY SSF51735 NAD(P)-binding Rossmann-fold domains IPR036291 NAD(P)-binding domain superfamily 232 375 5.07E-33
Pfam PF02080 TrkA-C domain IPR006037 Regulator of K+ conductance, C-terminal 389 450 8.7E-11
SUPERFAMILY SSF116726 TrkA C-terminal domain-like IPR036721 Regulator of K+ conductance, C-terminal domain superfamily 361 444 1.28E-8
Pfam PF02254 TrkA-N domain IPR003148 Regulator of K+ conductance, N-terminal 234 349 3.0E-24
Pfam PF02080 TrkA-C domain IPR006037 Regulator of K+ conductance, C-terminal 155 223 1.4E-12
PRINTS PR00335 TrkA potassium uptake protein signature IPR006036 Potassium uptake protein TrkA 19 33 7.3E-31
PRINTS PR00335 TrkA potassium uptake protein signature IPR006036 Potassium uptake protein TrkA 73 87 7.3E-31
Gene3D G3DSA:3.40.50.720 - - - 1 140 1.7E-46
PRINTS PR00335 TrkA potassium uptake protein signature IPR006036 Potassium uptake protein TrkA 2 16 7.3E-31
SUPERFAMILY SSF116726 TrkA C-terminal domain-like IPR036721 Regulator of K+ conductance, C-terminal domain superfamily 146 224 1.96E-11
PANTHER PTHR43833 POTASSIUM CHANNEL PROTEIN 2-RELATED-RELATED - - 1 225 1.7E-81

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.