Pseudomonas stutzeri A1501, PST_1452

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0003723	RNA binding	ISM Inferred from Sequence Model Term mapped from: InterPro:G3DSA:3.10.290.10	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0009982	pseudouridine synthase activity	ISM Inferred from Sequence Model Term mapped from: InterPro:SSF55120	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0009451	RNA modification	ISM Inferred from Sequence Model Term mapped from: InterPro:SSF55120	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0001522	pseudouridine synthesis	ISM Inferred from Sequence Model Term mapped from: InterPro:SSF55120	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
SMART	SM00363	s4_6	IPR002942	RNA-binding S4 domain	5	70	1.4E-6
Pfam	PF01479	S4 domain	IPR002942	RNA-binding S4 domain	5	49	7.3E-6
CDD	cd00165	S4	-	-	5	62	3.08999E-7
PANTHER	PTHR47683	PSEUDOURIDINE SYNTHASE FAMILY PROTEIN-RELATED	-	-	3	237	2.9E-30
MobiDBLite	mobidb-lite	consensus disorder prediction	-	-	76	100	-
Gene3D	G3DSA:3.30.2350.10	Pseudouridine synthase	-	-	64	240	1.7E-22
SUPERFAMILY	SSF55120	Pseudouridine synthase	IPR020103	Pseudouridine synthase, catalytic domain superfamily	65	240	1.01E-18
Gene3D	G3DSA:3.10.290.10	-	IPR036986	RNA-binding S4 domain superfamily	2	55	2.8E-12
SUPERFAMILY	SSF55174	Alpha-L RNA-binding motif	-	-	5	84	1.7E-11
Coils	Coil	Coil	-	-	127	147	-

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.