Pseudomonas stutzeri A1501, PST_2045 (oprF)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR01021
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR01021 OMPA domain signature IPR006664 Outer membrane protein, bacterial 209 231 5.5E-18
Gene3D G3DSA:3.30.1330.60 - IPR036737 OmpA-like domain superfamily 189 313 3.6E-41
SUPERFAMILY SSF56925 OMPA-like IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel 16 168 1.33E-13
MobiDBLite mobidb-lite consensus disorder prediction - - 284 315 -
PRINTS PR01021 OMPA domain signature IPR006664 Outer membrane protein, bacterial 239 254 5.5E-18
Pfam PF00691 OmpA family IPR006665 OmpA-like domain 209 304 1.3E-24
CDD cd07185 OmpA_C-like IPR006665 OmpA-like domain 204 310 5.69328E-47
PANTHER PTHR30329 STATOR ELEMENT OF FLAGELLAR MOTOR COMPLEX - - 199 307 1.1E-31
PRINTS PR01021 OMPA domain signature IPR006664 Outer membrane protein, bacterial 254 270 5.5E-18
Pfam PF05736 OprF membrane domain IPR008722 Outer membrane porin F, N-terminal 1 171 8.6E-72
Gene3D G3DSA:2.40.160.20 - - - 3 168 1.3E-47
SUPERFAMILY SSF103088 OmpA-like IPR036737 OmpA-like domain superfamily 184 309 2.22E-39

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.