Pseudomonas stutzeri A1501, PST_2220

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01609
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004803 transposase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01609
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006313 transposition, DNA-mediated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01609
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PANTHER PTHR35604 TRANSPOSASE INSH FOR INSERTION SEQUENCE ELEMENT IS5A-RELATED - - 1 353 8.0E-65
NCBIfam NF033581 NCBIFAM: IS5 family transposase IPR047959 IS5 family transposase 30 346 1.4E-78
Pfam PF05598 Transposase domain (DUF772) IPR008490 Transposase InsH, N-terminal 53 124 2.1E-21
Coils Coil Coil - - 360 361 -
Pfam PF01609 Transposase DDE domain IPR002559 Transposase IS4-like domain 202 346 4.0E-14
MobiDBLite mobidb-lite consensus disorder prediction - - 160 204 -

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.