Pseudomonas stutzeri A1501, PST_3948

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006935 chemotaxis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01584
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000155 phosphorelay sensor kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM01231
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF47226
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0007165 signal transduction
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01584
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0016310 phosphorylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005737 cytoplasm
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM01231
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004673 protein histidine kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM01231
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016772 transferase activity, transferring phosphorus-containing groups
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG psa02020 Two-component system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psa02025 Biofilm formation - Pseudomonas aeruginosa 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1264 1356 1.15829E-12
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 917 1011 4.96116E-5
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 751 843 2.8E-13
Coils Coil Coil - - 1347 1367 -
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1266 1365 3.1E-14
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 433 556 1.12E-14
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 14 136 1.1E-9
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1654 1758 1.1E-4
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 2323 2436 4.6E-35
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 917 1038 8.51E-17
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1655 1759 3.30882E-11
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 917 1013 0.16
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 1507 1636 4.9E-26
SMART SM00387 HKATPase_4 IPR003594 Histidine kinase/HSP90-like ATPase 2014 2155 1.4E-23
Pfam PF01584 CheW-like domain IPR002545 CheW-like domain 2160 2292 8.5E-23
SUPERFAMILY SSF50341 CheW-like IPR036061 CheW-like domain superfamily 2154 2287 6.93E-24
Gene3D G3DSA:3.30.565.10 - IPR036890 Histidine kinase/HSP90-like ATPase superfamily 1968 2154 1.0E-53
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 749 838 2.44063E-10
Coils Coil Coil - - 1868 1888 -
Gene3D G3DSA:3.40.50.2300 - - - 2325 2443 3.8E-39
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1509 1609 5.8E-13
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 749 846 5.0E-9
SUPERFAMILY SSF55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase IPR036890 Histidine kinase/HSP90-like ATPase superfamily 1971 2152 1.1E-36
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 2325 2437 1.6E-26
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 10 100 4.0E-7
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 1264 1386 9.03E-26
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 919 1010 1.0E-10
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 2059 2073 2.9E-10
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 1059 1184 6.6E-13
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 2324 2441 3.42E-35
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 2139 2152 2.9E-10
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1507 1604 2.4E-4
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 749 877 1.4E-26
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 1262 1390 2.7E-26
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1264 1361 6.2E-5
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1507 1605 2.94354E-14
MobiDBLite mobidb-lite consensus disorder prediction - - 1212 1254 -
Coils Coil Coil - - 1204 1248 -
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 905 1011 2.0E-16
Coils Coil Coil - - 1708 1728 -
MobiDBLite mobidb-lite consensus disorder prediction - - 1759 1789 -
CDD cd16916 HATPase_CheA-like - - 1977 2152 5.80376E-82
Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IPR003594 Histidine kinase/HSP90-like ATPase 2018 2154 2.8E-15
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 2115 2133 2.9E-10
FunFam G3DSA:3.30.565.10:FF:000016 Chemotaxis protein CheA, putative - - 1970 2154 1.7E-61
SMART SM01231 H_kinase_dim_2 IPR004105 Histidine kinase CheA-like, homodimeric domain 1830 1969 1.9E-10
MobiDBLite mobidb-lite consensus disorder prediction - - 1213 1247 -
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 1507 1629 3.01E-25
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 1653 1782 4.0E-24
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 7 130 5.23E-22
Gene3D G3DSA:2.30.30.40 SH3 Domains - - 2229 2290 2.4E-20
PANTHER PTHR43395 SENSOR HISTIDINE KINASE CHEA - - 1510 2440 0.0
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 1656 1763 4.45E-20
CDD cd17546 REC_hyHK_CKI1_RcsC-like - - 2325 2436 2.14354E-30
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 749 874 5.13E-27
SMART SM00260 chew_2 IPR002545 CheW-like domain 2147 2291 1.6E-32
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 1058 1179 9.08E-14
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1656 1749 2.9E-14

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.