Pseudomonas stutzeri ATCC 17588 = LMG 11199, PSTAB_3500 (nirD)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0043565 | sequence-specific DNA binding |
Inferred from Sequence Model
Term mapped from: InterPro:PF13404
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ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| PANTHER | PTHR43413 | TRANSCRIPTIONAL REGULATOR, ASNC FAMILY | - | - | 2 | 125 | 3.3E-25 |
| Pfam | PF17805 | AsnC-like ligand binding domain | IPR040523 | Siroheme decarboxylase , AsnC-like ligand binding domain | 66 | 130 | 9.1E-19 |
| Gene3D | G3DSA:3.30.70.3460 | - | - | - | 66 | 146 | 1.0E-20 |
| Gene3D | G3DSA:1.10.10.10 | - | IPR036388 | Winged helix-like DNA-binding domain superfamily | 1 | 54 | 1.2E-6 |
| Pfam | PF13404 | AsnC-type helix-turn-helix domain | IPR000485 | AsnC-type HTH domain | 3 | 47 | 1.4E-6 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.