Pseudomonas stutzeri DSM 4166, PSTAA_0021 (fmt)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0071951 conversion of methionyl-tRNA to N-formyl-methionyl-tRNA
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00182
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009058 biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02911
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004479 methionyl-tRNA formyltransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd08646
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003824 catalytic activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF50486
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG psr00970 Aminoacyl-tRNA biosynthesis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psr00670 One carbon pool by folate 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.10.25.10 - IPR037022 Formyl transferase, C-terminal domain superfamily 210 312 1.9E-30
CDD cd08646 FMT_core_Met-tRNA-FMT_N IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain 5 208 1.41628E-113
PANTHER PTHR11138 METHIONYL-TRNA FORMYLTRANSFERASE - - 2 306 2.1E-84
CDD cd08704 Met_tRNA_FMT_C IPR044135 Methionyl-tRNA formyltransferase, C-terminal domain 211 293 2.07906E-35
FunFam G3DSA:3.40.50.170:FF:000003 Methionyl-tRNA formyltransferase - - 1 209 6.0E-107
Gene3D G3DSA:3.40.50.170 - - - 1 209 1.5E-78
Pfam PF00551 Formyl transferase IPR002376 Formyl transferase, N-terminal 6 184 2.1E-47
SUPERFAMILY SSF50486 FMT C-terminal domain-like IPR011034 Formyl transferase-like, C-terminal domain superfamily 208 310 4.71E-31
Pfam PF02911 Formyl transferase, C-terminal domain IPR005793 Formyl transferase, C-terminal 207 302 5.4E-24
FunFam G3DSA:3.40.50.12230:FF:000001 Methionyl-tRNA formyltransferase - - 5 308 2.6E-113
SUPERFAMILY SSF53328 Formyltransferase IPR036477 Formyl transferase, N-terminal domain superfamily 5 210 1.15E-69
NCBIfam TIGR00460 JCVI: methionyl-tRNA formyltransferase IPR005794 Methionyl-tRNA formyltransferase 5 306 8.2E-95
Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. IPR005794 Methionyl-tRNA formyltransferase 5 305 37.402111

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.