Pseudomonas stutzeri DSM 4166, PSTAA_4206

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0009253 peptidoglycan catabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.40.80.10
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008745 N-acetylmuramoyl-L-alanine amidase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.40.80.10
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF55846 N-acetylmuramoyl-L-alanine amidase-like IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily 21 175 8.38E-51
SUPERFAMILY SSF47090 PGBD-like IPR036365 PGBD-like superfamily 193 257 1.49E-17
Pfam PF01471 Putative peptidoglycan binding domain IPR002477 Peptidoglycan binding-like 200 253 3.5E-7
Pfam PF01510 N-acetylmuramoyl-L-alanine amidase IPR002502 N-acetylmuramoyl-L-alanine amidase domain 33 165 1.1E-28
Gene3D G3DSA:3.40.80.10 - IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily 33 178 1.4E-51
FunFam G3DSA:3.40.80.10:FF:000003 N-acetylmuramoyl-L-alanine amidase - - 33 178 7.3E-60
PANTHER PTHR30417 N-ACETYLMURAMOYL-L-ALANINE AMIDASE AMID - - 32 255 8.5E-57
SMART SM00644 ami_2 IPR002502 N-acetylmuramoyl-L-alanine amidase domain 24 164 1.4E-32
Gene3D G3DSA:1.10.101.10 - IPR036366 PGBD superfamily 179 258 8.7E-26
CDD cd06583 PGRP IPR002502 N-acetylmuramoyl-L-alanine amidase domain 34 166 9.37331E-30

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.