Pseudomonas stutzeri CCUG 29243, A458_01000

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0009253	peptidoglycan catabolic process	ISM Inferred from Sequence Model Term mapped from: InterPro:PF01510	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0008745	N-acetylmuramoyl-L-alanine amidase activity	ISM Inferred from Sequence Model Term mapped from: InterPro:PF01510	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
SUPERFAMILY	SSF47090	PGBD-like	IPR036365	PGBD-like superfamily	186	256	2.35E-18
SUPERFAMILY	SSF55846	N-acetylmuramoyl-L-alanine amidase-like	IPR036505	N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily	21	175	1.83E-49
FunFam	G3DSA:3.40.80.10:FF:000003	N-acetylmuramoyl-L-alanine amidase	-	-	33	178	1.4E-58
Gene3D	G3DSA:3.40.80.10	-	IPR036505	N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily	33	178	3.5E-50
Gene3D	G3DSA:1.10.101.10	-	IPR036366	PGBD superfamily	179	258	1.4E-26
Pfam	PF01471	Putative peptidoglycan binding domain	IPR002477	Peptidoglycan binding-like	202	253	8.7E-7
Pfam	PF01510	N-acetylmuramoyl-L-alanine amidase	IPR002502	N-acetylmuramoyl-L-alanine amidase domain	34	165	3.5E-27
PANTHER	PTHR30417	N-ACETYLMURAMOYL-L-ALANINE AMIDASE AMID	-	-	25	255	2.0E-56
SMART	SM00644	ami_2	IPR002502	N-acetylmuramoyl-L-alanine amidase domain	23	164	1.7E-30
CDD	cd06583	PGRP	IPR002502	N-acetylmuramoyl-L-alanine amidase domain	34	166	1.80216E-28

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.