Pseudomonas stutzeri CCUG 29243, A458_01565

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0000155 phosphorelay sensor kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM01231
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016772 transferase activity, transferring phosphorus-containing groups
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006935 chemotaxis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM01231
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0016310 phosphorylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00073
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004673 protein histidine kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM01231
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005737 cytoplasm
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM01231
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0007165 signal transduction
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01584
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG psc02025 Biofilm formation - Pseudomonas aeruginosa 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psc02020 Two-component system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:2.30.30.40 SH3 Domains - - 2173 2233 2.4E-19
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1456 1553 3.3E-4
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 744 875 6.0E-27
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 2083 2096 4.5E-10
Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IPR003594 Histidine kinase/HSP90-like ATPase 1962 2098 7.3E-14
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 897 993 0.32
MobiDBLite mobidb-lite consensus disorder prediction - - 1188 1215 -
MobiDBLite mobidb-lite consensus disorder prediction - - 655 676 -
Coils Coil Coil - - 1812 1832 -
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 744 868 3.79E-26
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 14 126 6.4E-10
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 1596 1728 3.2E-23
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 744 833 8.70582E-9
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1605 1696 5.4E-14
Pfam PF01584 CheW-like domain IPR002545 CheW-like domain 2104 2236 1.0E-21
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 2269 2381 9.1E-27
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 1040 1163 1.7E-12
MobiDBLite mobidb-lite consensus disorder prediction - - 1709 1730 -
MobiDBLite mobidb-lite consensus disorder prediction - - 1398 1418 -
MobiDBLite mobidb-lite consensus disorder prediction - - 1351 1380 -
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1223 1322 1.1E-13
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1221 1319 2.04975E-12
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 899 994 2.1E-10
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 1605 1711 1.06E-19
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 2267 2380 3.3E-35
SMART SM00387 HKATPase_4 IPR003594 Histidine kinase/HSP90-like ATPase 1958 2099 3.3E-23
MobiDBLite mobidb-lite consensus disorder prediction - - 1191 1215 -
CDD cd16916 HATPase_CheA-like - - 1921 2096 3.92531E-81
CDD cd17546 REC_hyHK_CKI1_RcsC-like - - 2269 2380 6.90816E-30
Gene3D G3DSA:3.40.50.2300 - - - 2269 2387 7.0E-39
SUPERFAMILY SSF55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase IPR036890 Histidine kinase/HSP90-like ATPase superfamily 1915 2096 7.33E-37
FunFam G3DSA:3.30.565.10:FF:000016 Chemotaxis protein CheA, putative - - 1914 2098 2.7E-61
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 2003 2017 4.5E-10
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 1219 1346 1.9E-25
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 886 991 1.9E-16
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 744 841 9.4E-6
SUPERFAMILY SSF50341 CheW-like IPR036061 CheW-like domain superfamily 2098 2232 5.75E-23
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 1456 1578 2.75E-25
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 1221 1342 5.76E-24
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1456 1554 1.11332E-13
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1604 1705 1.76203E-10
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1603 1700 1.4E-4
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 10 108 5.0E-7
PANTHER PTHR43395 SENSOR HISTIDINE KINASE CHEA - - 1451 2384 0.0
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 433 556 2.3E-14
SMART SM00260 chew_2 IPR002545 CheW-like domain 2091 2235 2.2E-32
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 1456 1585 3.1E-26
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 2268 2384 3.27E-35
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1221 1318 0.0074
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 7 130 1.57E-21
Gene3D G3DSA:3.30.565.10 - IPR036890 Histidine kinase/HSP90-like ATPase superfamily 1912 2098 2.2E-52
Coils Coil Coil - - 1657 1677 -
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 897 1018 7.2E-17
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 746 828 7.1E-14
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1458 1558 6.6E-13
SMART SM01231 H_kinase_dim_2 IPR004105 Histidine kinase CheA-like, homodimeric domain 1774 1913 1.9E-10
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 1038 1159 1.29E-13
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 2059 2077 4.5E-10

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.