Pseudomonas stutzeri CCUG 29243, A458_01675

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00778
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003700 DNA-binding transcription factor activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00778
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008757 S-adenosylmethionine-dependent methyltransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF53335
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:1.10.10.10 - IPR036388 Winged helix-like DNA-binding domain superfamily 4 110 1.4E-18
CDD cd00090 HTH_ARSR IPR011991 ArsR-like helix-turn-helix domain 24 83 9.04053E-12
Pfam PF12840 Helix-turn-helix domain - - 21 75 6.9E-10
Gene3D G3DSA:3.40.50.150 Vaccinia Virus protein VP39 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase superfamily 111 312 1.1E-30
SUPERFAMILY SSF53335 S-adenosyl-L-methionine-dependent methyltransferases IPR029063 S-adenosyl-L-methionine-dependent methyltransferase superfamily 157 311 4.22E-33
NCBIfam NF033788 NCBIFAM: metalloregulator ArsR/SmtB family transcription factor - - 17 85 7.2E-19
SUPERFAMILY SSF46785 Winged helix DNA-binding domain IPR036390 Winged helix DNA-binding domain superfamily 13 206 1.39E-24
PANTHER PTHR43861 TRANS-ACONITATE 2-METHYLTRANSFERASE-RELATED - - 157 278 2.9E-15
PRINTS PR00778 Bacterial regulatory protein ArsR family signature IPR001845 HTH ArsR-type DNA-binding domain 20 35 1.1E-8
Pfam PF13489 Methyltransferase domain - - 153 277 5.1E-16
SMART SM00418 arsrmega2 IPR001845 HTH ArsR-type DNA-binding domain 18 103 1.5E-8
CDD cd02440 AdoMet_MTases - - 168 265 2.01338E-12
PRINTS PR00778 Bacterial regulatory protein ArsR family signature IPR001845 HTH ArsR-type DNA-binding domain 52 67 1.1E-8
PRINTS PR00778 Bacterial regulatory protein ArsR family signature IPR001845 HTH ArsR-type DNA-binding domain 67 82 1.1E-8

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.