Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Biological Process | GO:0019632 | shikimate metabolic process |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00507
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0050661 | NADP binding |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00507
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0004764 | shikimate 3-dehydrogenase (NADP+) activity |
Inferred from Sequence Model
Term mapped from: InterPro:PTHR21089
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
|
Database | Xref | Pathway | Version | Evidence | PMID |
---|---|---|---|---|---|
KEGG | psj01230 | Biosynthesis of amino acids | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
KEGG | psj01100 | Metabolic pathways | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
KEGG | psj01130 | Biosynthesis of antibiotics | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
KEGG | psj01110 | Biosynthesis of secondary metabolites | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
MetaCyc | chorismate biosynthesis from 3-dehydroquinate | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
||
KEGG | psj00400 | Phenylalanine, tyrosine and tryptophan biosynthesis | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
FunFam | G3DSA:3.40.50.720:FF:000104 | Shikimate dehydrogenase (NADP(+)) | - | - | 101 | 244 | 5.9E-53 |
SUPERFAMILY | SSF51735 | NAD(P)-binding Rossmann-fold domains | IPR036291 | NAD(P)-binding domain superfamily | 101 | 269 | 2.24E-39 |
Pfam | PF08501 | Shikimate dehydrogenase substrate binding domain | IPR013708 | Shikimate dehydrogenase substrate binding, N-terminal | 6 | 87 | 7.3E-24 |
CDD | cd01065 | NAD_bind_Shikimate_DH | - | - | 100 | 254 | 2.82679E-44 |
FunFam | G3DSA:3.40.50.10860:FF:000006 | Shikimate dehydrogenase (NADP(+)) | - | - | 5 | 119 | 1.4E-40 |
Gene3D | G3DSA:3.40.50.10860 | Leucine Dehydrogenase, chain A, domain 1 | - | - | 6 | 254 | 1.1E-86 |
Gene3D | G3DSA:3.40.50.720 | - | - | - | 101 | 244 | 1.1E-86 |
Pfam | PF18317 | Shikimate 5'-dehydrogenase C-terminal domain | IPR041121 | SDH, C-terminal | 237 | 266 | 4.6E-12 |
NCBIfam | TIGR00507 | JCVI: shikimate dehydrogenase | IPR011342 | Shikimate dehydrogenase | 4 | 270 | 3.2E-77 |
SUPERFAMILY | SSF53223 | Aminoacid dehydrogenase-like, N-terminal domain | IPR046346 | Aminoacid dehydrogenase-like, N-terminal domain superfamily | 1 | 100 | 9.21E-31 |
PANTHER | PTHR21089 | SHIKIMATE DEHYDROGENASE | IPR022893 | Shikimate dehydrogenase family | 2 | 258 | 6.2E-62 |
Pfam | PF01488 | Shikimate / quinate 5-dehydrogenase | IPR006151 | Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase | 117 | 191 | 1.2E-9 |
Hamap | MF_00222 | Shikimate dehydrogenase (NADP(+)) [aroE]. | IPR022893 | Shikimate dehydrogenase family | 1 | 269 | 31.371649 |