Pseudomonas stutzeri DSM 10701, PSJM300_01685

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00088
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0016310 phosphorylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0007165 signal transduction
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01584
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006935 chemotaxis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01584
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004673 protein histidine kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM01231
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000155 phosphorelay sensor kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM01231
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016772 transferase activity, transferring phosphorus-containing groups
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005737 cytoplasm
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM01231
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG psj02020 Two-component system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psj02025 Biofilm formation - Pseudomonas aeruginosa 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 2237 2349 5.0E-27
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 2028 2046 4.9E-11
SMART SM00260 chew_2 IPR002545 CheW-like domain 2060 2204 1.8E-34
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 14 137 2.1E-11
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 10 108 1.8E-8
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 2235 2348 2.3E-35
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1428 1525 6.9E-6
CDD cd17546 REC_hyHK_CKI1_RcsC-like - - 2237 2348 1.6515E-30
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 1203 1323 9.94E-27
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 887 1023 4.7E-17
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1428 1526 1.02576E-13
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1571 1672 2.2E-8
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 2236 2353 1.99E-35
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 887 1008 2.75E-18
SUPERFAMILY SSF55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase IPR036890 Histidine kinase/HSP90-like ATPase superfamily 1884 2065 5.5E-37
Coils Coil Coil - - 1781 1801 -
FunFam G3DSA:3.30.565.10:FF:000016 Chemotaxis protein CheA, putative - - 1883 2067 9.1E-63
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 1573 1681 3.53E-21
SMART SM00387 HKATPase_4 IPR003594 Histidine kinase/HSP90-like ATPase 1927 2068 2.7E-24
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 2052 2065 4.9E-11
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 1428 1548 1.18E-26
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 1030 1161 1.9E-15
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 1972 1986 4.9E-11
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 737 834 1.7E-6
SMART SM01231 H_kinase_dim_2 IPR004105 Histidine kinase CheA-like, homodimeric domain 1743 1882 1.9E-10
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1205 1297 4.5E-15
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 1421 1555 5.7E-27
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 737 860 3.14E-26
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 887 980 1.60212E-5
CDD cd16916 HATPase_CheA-like - - 1890 2065 1.14321E-81
SUPERFAMILY SSF50341 CheW-like IPR036061 CheW-like domain superfamily 2067 2200 2.88E-25
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 1028 1150 5.89E-16
Gene3D G3DSA:3.40.50.2300 - - - 2237 2355 4.9E-39
PANTHER PTHR43395 SENSOR HISTIDINE KINASE CHEA - - 1694 2355 0.0
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1430 1527 1.0E-15
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 737 826 3.08916E-10
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 7 129 8.51E-22
Gene3D G3DSA:2.30.30.40 SH3 Domains - - 2142 2202 4.4E-21
Coils Coil Coil - - 1286 1306 -
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 737 866 1.1E-27
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 1570 1697 8.2E-25
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 889 975 8.0E-11
Gene3D G3DSA:3.30.565.10 - IPR036890 Histidine kinase/HSP90-like ATPase superfamily 1881 2067 7.3E-54
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 433 553 1.88E-10
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1572 1669 6.43048E-11
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 887 983 0.054
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 739 816 4.4E-13
Coils Coil Coil - - 1575 1599 -
Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IPR003594 Histidine kinase/HSP90-like ATPase 1931 2067 1.6E-15
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1203 1300 4.5E-14
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1203 1301 2.43704E-15
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 1201 1327 9.7E-28
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1573 1672 5.4E-14
Pfam PF01584 CheW-like domain IPR002545 CheW-like domain 2073 2205 5.2E-24

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.