Pseudomonas stutzeri DSM 10701, PSJM300_18055
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| CDD | cd01949 | GGDEF | IPR000160 | GGDEF domain | 454 | 608 | 1.28252E-55 |
| Pfam | PF00990 | Diguanylate cyclase, GGDEF domain | IPR000160 | GGDEF domain | 451 | 607 | 3.1E-42 |
| Coils | Coil | Coil | - | - | 118 | 138 | - |
| PANTHER | PTHR45138 | REGULATORY COMPONENTS OF SENSORY TRANSDUCTION SYSTEM | - | - | 96 | 609 | 1.3E-64 |
| SUPERFAMILY | SSF55073 | Nucleotide cyclase | IPR029787 | Nucleotide cyclase | 456 | 609 | 4.24E-46 |
| Coils | Coil | Coil | - | - | 6 | 37 | - |
| Coils | Coil | Coil | - | - | 423 | 450 | - |
| Coils | Coil | Coil | - | - | 328 | 348 | - |
| FunFam | G3DSA:3.30.70.270:FF:000001 | Diguanylate cyclase domain protein | - | - | 445 | 612 | 1.6E-47 |
| Gene3D | G3DSA:3.30.70.270 | - | IPR043128 | Reverse transcriptase/Diguanylate cyclase domain | 437 | 610 | 9.6E-53 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 233 | 252 | - |
| SMART | SM00267 | duf1_3 | IPR000160 | GGDEF domain | 440 | 611 | 3.6E-55 |
| NCBIfam | TIGR00254 | JCVI: diguanylate cyclase (GGDEF) domain | IPR000160 | GGDEF domain | 449 | 609 | 3.0E-44 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.