Pseudomonas stutzeri RCH2, Psest_0188
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Coils | Coil | Coil | - | - | 5 | 25 | - |
| Gene3D | G3DSA:3.30.70.270 | - | IPR043128 | Reverse transcriptase/Diguanylate cyclase domain | 464 | 632 | 1.3E-55 |
| NCBIfam | TIGR00254 | JCVI: diguanylate cyclase (GGDEF) domain | IPR000160 | GGDEF domain | 470 | 631 | 3.5E-45 |
| Coils | Coil | Coil | - | - | 419 | 439 | - |
| FunFam | G3DSA:3.30.70.270:FF:000001 | Diguanylate cyclase domain protein | - | - | 467 | 632 | 2.1E-49 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 231 | 255 | - |
| SMART | SM00267 | duf1_3 | IPR000160 | GGDEF domain | 461 | 632 | 8.6E-54 |
| Pfam | PF00990 | Diguanylate cyclase, GGDEF domain | IPR000160 | GGDEF domain | 472 | 628 | 2.8E-42 |
| SUPERFAMILY | SSF55073 | Nucleotide cyclase | IPR029787 | Nucleotide cyclase | 477 | 630 | 7.69E-48 |
| CDD | cd01949 | GGDEF | IPR000160 | GGDEF domain | 475 | 629 | 2.0267E-60 |
| PANTHER | PTHR45138 | REGULATORY COMPONENTS OF SENSORY TRANSDUCTION SYSTEM | - | - | 175 | 631 | 2.8E-67 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.