Pseudomonas stutzeri RCH2, Psest_0824
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0043565 | sequence-specific DNA binding |
Inferred from Sequence Model
Term mapped from: InterPro:PF13404
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| SMART | SM00344 | asnc | IPR019888 | Transcription regulator AsnC-like | 1 | 109 | 1.9E-4 |
| Pfam | PF17805 | AsnC-like ligand binding domain | IPR040523 | Siroheme decarboxylase , AsnC-like ligand binding domain | 67 | 139 | 7.5E-16 |
| Coils | Coil | Coil | - | - | 27 | 47 | - |
| Gene3D | G3DSA:3.30.70.3460 | - | - | - | 65 | 147 | 5.2E-19 |
| Gene3D | G3DSA:1.10.10.10 | - | IPR036388 | Winged helix-like DNA-binding domain superfamily | 2 | 54 | 4.2E-10 |
| Pfam | PF13404 | AsnC-type helix-turn-helix domain | IPR000485 | AsnC-type HTH domain | 1 | 44 | 1.6E-9 |
| FunFam | G3DSA:3.30.70.3460:FF:000001 | Heme d1 biosynthesis protein NirG | - | - | 65 | 147 | 5.0E-39 |
| PANTHER | PTHR43413 | TRANSCRIPTIONAL REGULATOR, ASNC FAMILY | - | - | 1 | 125 | 1.2E-25 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.