Pseudomonas stutzeri RCH2, Psest_4329

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0004129 cytochrome-c oxidase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:1.20.120.80
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:1.20.120.80
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0009055 electron transfer activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR11403
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0019646 aerobic electron transport chain
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR11403
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0022904 respiratory electron transport chain
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:1.20.120.80
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG psh00190 Oxidative phosphorylation 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psh01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF81452 Cytochrome c oxidase subunit III-like IPR035973 Cytochrome c oxidase subunit III-like superfamily 6 297 2.75E-84
Gene3D G3DSA:1.10.287.70 - - - 3 78 2.2E-20
Pfam PF00510 Cytochrome c oxidase subunit III IPR000298 Cytochrome c oxidase subunit III-like 158 297 4.1E-43
CDD cd01665 Cyt_c_Oxidase_III IPR033945 Cytochrome c oxidase subunit III domain 20 297 4.11631E-85
Pfam PF00510 Cytochrome c oxidase subunit III IPR000298 Cytochrome c oxidase subunit III-like 9 111 6.4E-11
FunFam G3DSA:1.20.120.80:FF:000003 Cytochrome c oxidase subunit 3 - - 80 298 6.6E-100
Gene3D G3DSA:1.20.120.80 - IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle 80 298 2.0E-71
PANTHER PTHR11403 CYTOCHROME C OXIDASE SUBUNIT III IPR024791 Cytochrome c oxidase subunit III 7 298 1.2E-74
FunFam G3DSA:1.10.287.70:FF:000082 Cytochrome c oxidase subunit 3 - - 1 79 5.7E-22

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.