Pseudomonas mendocina NK-01, MDS_0025
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| NCBIfam | TIGR03357 | JCVI: type VI secretion system baseplate subunit TssE | IPR017737 | Type VI secretion system protein TssE1-like | 12 | 162 | 9.7E-27 |
| PANTHER | PTHR38595 | CYTOPLASMIC PROTEIN-RELATED | - | - | 1 | 162 | 1.9E-46 |
| Pfam | PF04965 | Baseplate wedge protein gp25 | IPR007048 | IraD/Gp25-like | 40 | 142 | 9.8E-21 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 14 | 29 | - |
| SUPERFAMILY | SSF160719 | gpW/gp25-like | - | - | 41 | 153 | 8.37E-10 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 1 | 32 | - |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.