Pseudomonas mendocina NK-01, MDS_0031
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0061810 | NAD glycohydrolase activity |
Inferred from Sequence Model
Term mapped from: InterPro:PF14021
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Pfam | PF14021 | Tuberculosis necrotizing toxin | IPR025331 | Tuberculosis necrotizing toxin | 1419 | 1512 | 1.7E-27 |
| Pfam | PF20148 | Domain of unknown function (DUF6531) | IPR045351 | Domain of unknown function DUF6531 | 307 | 385 | 1.2E-20 |
| NCBIfam | TIGR01643 | JCVI: YD repeat (two copies) | IPR006530 | YD repeat | 700 | 732 | 3.5E-4 |
| PANTHER | PTHR32305 | - | - | - | 979 | 1358 | 8.5E-43 |
| NCBIfam | TIGR01643 | JCVI: YD repeat (two copies) | IPR006530 | YD repeat | 785 | 825 | 9.3E-5 |
| NCBIfam | TIGR01643 | JCVI: YD repeat (two copies) | IPR006530 | YD repeat | 1145 | 1183 | 1.0E-6 |
| NCBIfam | TIGR01643 | JCVI: YD repeat (two copies) | IPR006530 | YD repeat | 594 | 629 | 0.0075 |
| Pfam | PF05593 | RHS Repeat | IPR031325 | RHS repeat | 679 | 715 | 6.6E-7 |
| Pfam | PF05593 | RHS Repeat | IPR031325 | RHS repeat | 721 | 757 | 1.7E-10 |
| NCBIfam | TIGR01643 | JCVI: YD repeat (two copies) | IPR006530 | YD repeat | 906 | 938 | 8.3E-5 |
| NCBIfam | TIGR01643 | JCVI: YD repeat (two copies) | IPR006530 | YD repeat | 950 | 985 | 0.0014 |
| Pfam | PF03527 | RHS protein | IPR001826 | RHS protein | 1253 | 1289 | 4.9E-14 |
| NCBIfam | TIGR01643 | JCVI: YD repeat (two copies) | IPR006530 | YD repeat | 742 | 778 | 4.8E-8 |
| Gene3D | G3DSA:2.180.10.10 | - | - | - | 476 | 798 | 3.9E-41 |
| SUPERFAMILY | SSF50969 | YVTN repeat-like/Quinoprotein amine dehydrogenase | IPR011044 | Quinoprotein amine dehydrogenase, beta chain-like | 683 | 875 | 4.32E-5 |
| Pfam | PF05593 | RHS Repeat | IPR031325 | RHS repeat | 785 | 820 | 5.6E-5 |
| PRINTS | PR00394 | RHS protein signature | IPR001826 | RHS protein | 1246 | 1266 | 7.8E-13 |
| Pfam | PF05593 | RHS Repeat | IPR031325 | RHS repeat | 805 | 838 | 4.7E-6 |
| CDD | cd14742 | PAAR_RHS | - | - | 176 | 232 | 9.99755E-20 |
| Pfam | PF05593 | RHS Repeat | IPR031325 | RHS repeat | 925 | 964 | 5.5E-5 |
| Pfam | PF05593 | RHS Repeat | IPR031325 | RHS repeat | 742 | 778 | 2.8E-11 |
| NCBIfam | TIGR01643 | JCVI: YD repeat (two copies) | IPR006530 | YD repeat | 1166 | 1201 | 0.005 |
| PRINTS | PR00394 | RHS protein signature | IPR001826 | RHS protein | 1326 | 1345 | 7.8E-13 |
| NCBIfam | TIGR03696 | JCVI: RHS repeat-associated core domain | IPR022385 | Rhs repeat-associated core | 1279 | 1358 | 1.0E-29 |
| Gene3D | G3DSA:2.180.10.10 | - | - | - | 802 | 965 | 4.2E-26 |
| NCBIfam | TIGR01643 | JCVI: YD repeat (two copies) | IPR006530 | YD repeat | 666 | 698 | 8.1E-6 |
| NCBIfam | TIGR01643 | JCVI: YD repeat (two copies) | IPR006530 | YD repeat | 615 | 652 | 2.1E-5 |
| Gene3D | G3DSA:2.60.200.60 | - | - | - | 163 | 232 | 1.1E-10 |
| Gene3D | G3DSA:2.180.10.10 | - | - | - | 966 | 1357 | 1.3E-79 |
| PRINTS | PR00394 | RHS protein signature | IPR001826 | RHS protein | 1303 | 1323 | 7.8E-13 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 123 | 144 | - |
| Pfam | PF05593 | RHS Repeat | IPR031325 | RHS repeat | 826 | 858 | 1.5E-4 |
| NCBIfam | TIGR01643 | JCVI: YD repeat (two copies) | IPR006530 | YD repeat | 826 | 866 | 2.1E-6 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.