Pseudomonas mendocina NK-01, MDS_0074
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Pfam | PF01476 | LysM domain | IPR018392 | LysM domain | 35 | 80 | 9.2E-13 |
| Gene3D | G3DSA:3.10.350.10 | LysM domain | IPR036779 | LysM domain superfamily | 24 | 87 | 1.9E-14 |
| PANTHER | PTHR34700 | POTASSIUM BINDING PROTEIN KBP | - | - | 8 | 333 | 3.0E-45 |
| CDD | cd00118 | LysM | IPR018392 | LysM domain | 35 | 81 | 1.19502E-9 |
| SMART | SM00257 | LysM_2 | IPR018392 | LysM domain | 34 | 82 | 0.0027 |
| SUPERFAMILY | SSF54106 | LysM domain | IPR036779 | LysM domain superfamily | 34 | 81 | 2.88E-7 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.