Pseudomonas mendocina NK-01, MDS_0075
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0009294 | DNA mediated transformation |
Inferred from Sequence Model
Term mapped from: InterPro:PTHR43022
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ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| NCBIfam | TIGR00732 | JCVI: DNA-processing protein DprA | IPR003488 | DNA recombination-mediator protein A | 80 | 299 | 3.3E-78 |
| Gene3D | G3DSA:1.10.10.10 | - | IPR036388 | Winged helix-like DNA-binding domain superfamily | 301 | 369 | 2.1E-10 |
| SUPERFAMILY | SSF102405 | MCP/YpsA-like | - | - | 92 | 300 | 1.07E-45 |
| Gene3D | G3DSA:3.40.50.450 | - | - | - | 6 | 300 | 4.9E-109 |
| Pfam | PF02481 | DNA recombination-mediator protein A | IPR003488 | DNA recombination-mediator protein A | 83 | 290 | 2.3E-75 |
| PANTHER | PTHR43022 | PROTEIN SMF | IPR003488 | DNA recombination-mediator protein A | 14 | 370 | 1.4E-97 |
| Pfam | PF17782 | DprA winged helix domain | IPR041614 | DprA, winged helix domain | 307 | 365 | 5.3E-12 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.