Pseudomonas mendocina NK-01, MDS_0534

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_0534
Name
Replicon chromosome
Genomic location 574710 - 575240 (- strand)

Cross-References

RefSeq YP_004378317.1
GI 330501448
Entrez 10455315
INSDC AEB56565.1
NCBI Locus Tag MDS_0534
UniParc UPI000206E94A
UniProtKB Acc F4DLN5
UniProtKB ID F4DLN5_PSEMN
UniRef100 UniRef100_F4DLN5
UniRef50 UniRef50_A4XPK0
UniRef90 UniRef90_A4XPK0

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) -4.97
Kyte-Doolittle Hydrophobicity Value -0.184
Molecular Weight (kDa) 19.8
Isoelectric Point (pI) 6.01

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 18 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004954 (510 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_0534

Human Homologs

References

No references are associated with this feature.