Pseudomonas mendocina NK-01, MDS_1066

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Cellular Component	GO:0005737	cytoplasm	ISM Inferred from Sequence Model Term mapped from: InterPro:TIGR01292	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0004791	thioredoxin-disulfide reductase activity	ISM Inferred from Sequence Model Term mapped from: InterPro:TIGR01292	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0016491	oxidoreductase activity	ISM Inferred from Sequence Model Term mapped from: InterPro:PF07992	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0019430	removal of superoxide radicals	ISM Inferred from Sequence Model Term mapped from: InterPro:TIGR01292	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	pmk00450	Selenocompound metabolism	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	pmk00240	Pyrimidine metabolism	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
PRINTS	PR00469	Pyridine nucleotide disulphide reductase class-II signature	-	-	8	30	5.8E-77
PRINTS	PR00469	Pyridine nucleotide disulphide reductase class-II signature	-	-	41	56	5.8E-77
NCBIfam	TIGR01292	JCVI: thioredoxin-disulfide reductase	IPR005982	Thioredoxin reductase	8	312	3.3E-117
PRINTS	PR00469	Pyridine nucleotide disulphide reductase class-II signature	-	-	107	115	5.8E-77
PRINTS	PR00469	Pyridine nucleotide disulphide reductase class-II signature	-	-	62	72	5.8E-77
PRINTS	PR00368	FAD-dependent pyridine nucleotide reductase signature	-	-	235	251	7.0E-42
SUPERFAMILY	SSF51905	FAD/NAD(P)-binding domain	IPR036188	FAD/NAD(P)-binding domain superfamily	2	313	1.62E-54
Pfam	PF07992	Pyridine nucleotide-disulphide oxidoreductase	IPR023753	FAD/NAD(P)-binding domain	8	299	1.4E-49
PRINTS	PR00469	Pyridine nucleotide disulphide reductase class-II signature	-	-	199	215	5.8E-77
PRINTS	PR00368	FAD-dependent pyridine nucleotide reductase signature	-	-	9	28	7.0E-42
PRINTS	PR00469	Pyridine nucleotide disulphide reductase class-II signature	-	-	275	293	5.8E-77
PRINTS	PR00368	FAD-dependent pyridine nucleotide reductase signature	-	-	265	287	7.0E-42
Gene3D	G3DSA:3.50.50.60	-	IPR036188	FAD/NAD(P)-binding domain superfamily	9	312	0.0
Gene3D	G3DSA:3.50.50.60	-	IPR036188	FAD/NAD(P)-binding domain superfamily	118	243	0.0
PRINTS	PR00469	Pyridine nucleotide disulphide reductase class-II signature	-	-	129	141	5.8E-77
PRINTS	PR00368	FAD-dependent pyridine nucleotide reductase signature	-	-	148	166	7.0E-42
PANTHER	PTHR48105	THIOREDOXIN REDUCTASE 1-RELATED-RELATED	-	-	7	313	1.5E-98
PRINTS	PR00469	Pyridine nucleotide disulphide reductase class-II signature	-	-	144	168	5.8E-77
PRINTS	PR00469	Pyridine nucleotide disulphide reductase class-II signature	-	-	237	258	5.8E-77
PRINTS	PR00368	FAD-dependent pyridine nucleotide reductase signature	-	-	106	124	7.0E-42

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.