Pseudomonas mendocina NK-01, MDS_1299

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_1299
Name
Replicon chromosome
Genomic location 1421925 - 1422539 (- strand)

Cross-References

RefSeq YP_004379082.1
GI 330502213
Entrez 10456081
INSDC AEB57330.1
NCBI Locus Tag MDS_1299
UniParc UPI000206E869
UniProtKB Acc F4DVC4
UniProtKB ID F4DVC4_PSEMN
UniRef100 UniRef100_F4DVC4
UniRef50 UniRef50_I4N8V7
UniRef90 UniRef90_F4DVC4

Product

Feature Type CDS
Coding Frame 1
Product Name
cold-shock DNA-binding protein family protein
Synonyms
Evidence for Translation
Charge (pH 7) 2.71
Kyte-Doolittle Hydrophobicity Value 0.360
Molecular Weight (kDa) 21811.1
Isoelectric Point (pI) 10.01

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 492 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000926 (537 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_1299

Human Homologs

References

No references are associated with this feature.