Pseudomonas mendocina NK-01, MDS_1873

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0008984 protein-glutamate methylesterase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01339
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005737 cytoplasm
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01339
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01339
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006935 chemotaxis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01339
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000156 phosphorelay response regulator activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01339
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pmk02020 Two-component system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pmk02030 Bacterial chemotaxis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF01339 CheB methylesterase IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase 193 369 4.4E-58
PANTHER PTHR42872 PROTEIN-GLUTAMATE METHYLESTERASE/PROTEIN-GLUTAMINE GLUTAMINASE - - 1 374 2.7E-127
Gene3D G3DSA:3.40.50.2300 - - - 2 138 3.4E-31
PIRSF PIRSF000876 RR_chemtxs_CheB IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type 1 374 0.0
CDD cd17541 REC_CheB-like - - 3 127 1.53108E-63
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 3 109 3.84E-27
Gene3D G3DSA:3.40.50.180 - IPR035909 Methylesterase CheB, C-terminal 186 372 1.6E-66
CDD cd16432 CheB_Rec IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase 192 371 4.54223E-94
FunFam G3DSA:3.40.50.180:FF:000001 Protein-glutamate methylesterase/protein-glutamine glutaminase - - 182 374 1.5E-96
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 3 122 2.3E-23
SUPERFAMILY SSF52738 Methylesterase CheB, C-terminal domain IPR035909 Methylesterase CheB, C-terminal 188 373 3.66E-63
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 5 109 8.0E-22
Hamap MF_00099 Protein-glutamate methylesterase/protein-glutamine glutaminase [cheB]. IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type 3 374 39.806351
FunFam G3DSA:3.40.50.2300:FF:000077 Chemotaxis response regulator - - 3 129 4.3E-61
MobiDBLite mobidb-lite consensus disorder prediction - - 141 181 -

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.