Pseudomonas mendocina NK-01, MDS_2187
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
|
|
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Gene3D | G3DSA:2.40.50.230 | - | IPR037026 | Vgr protein, OB-fold domain superfamily | 1 | 87 | 9.2E-33 |
| Pfam | PF04717 | Type VI secretion system/phage-baseplate injector OB domain | IPR006531 | Gp5/Type VI secretion system Vgr protein, OB-fold domain | 16 | 83 | 4.4E-14 |
| NCBIfam | TIGR01644 | JCVI: phage baseplate assembly protein V | IPR013046 | Phage baseplate assembly protein V/Gp45 | 8 | 127 | 1.7E-32 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.