Pseudomonas mendocina NK-01, MDS_3112

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00561
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009236 cobalamin biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00561
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008817 cob(I)yrinic acid a,c-diamide adenosyltransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00561
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pmk00860 Porphyrin and chlorophyll metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pmk01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/BtuR 39 208 5.3E-57
CDD cd00561 CobA_ACA IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/BtuR 39 208 4.85354E-88
Coils Coil Coil - - 17 37 -
NCBIfam TIGR00708 JCVI: cob(I)yrinic acid a,c-diamide adenosyltransferase IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/BtuR 34 208 9.2E-66
Pfam PF12557 Cob(I)alamin adenosyltransferase N terminal IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain 6 31 3.7E-7
PIRSF PIRSF015617 Adenosyltransferase_CobA IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/BtuR 11 208 2.7E-70
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 16 208 2.0E-65
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 17 208 4.68E-70
PANTHER PTHR46638 CORRINOID ADENOSYLTRANSFERASE IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/BtuR 10 208 2.6E-67

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.