Pseudomonas mendocina NK-01, MDS_4127
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0002161 | aminoacyl-tRNA editing activity |
Inferred from Sequence Model
Term mapped from: InterPro:PF04073
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| PANTHER | PTHR30411 | UNCHARACTERIZED | - | - | 45 | 196 | 1.1E-24 |
| CDD | cd04333 | ProX_deacylase | - | - | 44 | 191 | 2.4766E-70 |
| Gene3D | G3DSA:3.90.960.10 | - | IPR036754 | YbaK/aminoacyl-tRNA synthetase-associated domain superfamily | 42 | 199 | 7.9E-40 |
| SUPERFAMILY | SSF55826 | YbaK/ProRS associated domain | IPR036754 | YbaK/aminoacyl-tRNA synthetase-associated domain superfamily | 46 | 193 | 2.88E-37 |
| Pfam | PF04073 | Aminoacyl-tRNA editing domain | IPR007214 | YbaK/aminoacyl-tRNA synthetase-associated domain | 67 | 180 | 9.7E-22 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.