Pseudomonas mendocina NK-01, MDS_4347
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| KEGG | pmk01100 | Metabolic pathways | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | pmk00520 | Amino sugar and nucleotide sugar metabolism | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Pfam | PF01636 | Phosphotransferase enzyme family | IPR002575 | Aminoglycoside phosphotransferase | 38 | 258 | 5.6E-32 |
| PANTHER | PTHR33540 | TRNA THREONYLCARBAMOYLADENOSINE BIOSYNTHESIS PROTEIN TSAE | - | - | 35 | 311 | 5.8E-22 |
| Gene3D | G3DSA:3.90.1200.10 | - | - | - | 105 | 339 | 9.5E-65 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | IPR011009 | Protein kinase-like domain superfamily | 8 | 313 | 1.94E-52 |
| FunFam | G3DSA:3.90.1200.10:FF:000017 | Aminoglycoside phosphotransferase | - | - | 105 | 339 | 1.8E-113 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | - | - | 9 | 104 | 2.2E-25 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.