Pseudomonas mendocina NK-01, MDS_4439

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	pmk02020	Two-component system	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	pmk02010	ABC transporters	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
FunFam	G3DSA:3.40.190.10:FF:000052	Amino acid ABC transporter substrate-binding protein	-	-	133	228	3.2E-46
SUPERFAMILY	SSF53850	Periplasmic binding protein-like II	-	-	8	272	8.62E-62
Gene3D	G3DSA:3.40.190.10	-	-	-	133	228	6.0E-102
CDD	cd13688	PBP2_GltI_DEBP	-	-	30	268	2.4241E-111
SMART	SM00062	AABind_6	IPR001638	Solute-binding protein family 3/N-terminal domain of MltF	38	271	2.8E-52
Gene3D	G3DSA:3.40.190.10	-	-	-	29	273	6.0E-102
PANTHER	PTHR30085	AMINO ACID ABC TRANSPORTER PERMEASE	-	-	8	297	1.5E-81
Pfam	PF00497	Bacterial extracellular solute-binding proteins, family 3	IPR001638	Solute-binding protein family 3/N-terminal domain of MltF	39	269	2.4E-46

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.