Pseudomonas mendocina NK-01, MDS_4455

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0051536	iron-sulfur cluster binding	ISM Inferred from Sequence Model Term mapped from: InterPro:SSF54292	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0016491	oxidoreductase activity	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00175	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
CDD	cd00207	fer2	IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	284	366	3.66552E-21
CDD	cd06215	FNR_iron_sulfur_binding_1	-	-	22	253	0.0
SUPERFAMILY	SSF54292	2Fe-2S ferredoxin-like	IPR036010	2Fe-2S ferredoxin-like superfamily	244	366	5.24E-28
PRINTS	PR00406	Cytochrome B5 reductase signature	-	-	128	147	4.2E-9
PRINTS	PR00371	Flavoprotein pyridine nucleotide cytochrome reductase signature	IPR001709	Flavoprotein pyridine nucleotide cytochrome reductase	68	75	1.9E-5
PRINTS	PR00406	Cytochrome B5 reductase signature	-	-	68	75	4.2E-9
PRINTS	PR00371	Flavoprotein pyridine nucleotide cytochrome reductase signature	IPR001709	Flavoprotein pyridine nucleotide cytochrome reductase	221	229	1.9E-5
PRINTS	PR00371	Flavoprotein pyridine nucleotide cytochrome reductase signature	IPR001709	Flavoprotein pyridine nucleotide cytochrome reductase	165	176	1.9E-5
PRINTS	PR00371	Flavoprotein pyridine nucleotide cytochrome reductase signature	IPR001709	Flavoprotein pyridine nucleotide cytochrome reductase	128	147	1.9E-5
PRINTS	PR00406	Cytochrome B5 reductase signature	-	-	221	229	4.2E-9
PRINTS	PR00406	Cytochrome B5 reductase signature	-	-	105	119	4.2E-9
Pfam	PF00970	Oxidoreductase FAD-binding domain	IPR008333	Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain	26	117	2.3E-16
Gene3D	G3DSA:2.40.30.10	Translation factors	-	-	14	115	2.8E-26
PANTHER	PTHR47354	NADH OXIDOREDUCTASE HCR	-	-	18	366	2.4E-101
Gene3D	G3DSA:3.10.20.30	-	IPR012675	Beta-grasp domain superfamily	266	367	4.8E-24
SUPERFAMILY	SSF63380	Riboflavin synthase domain-like	IPR017938	Riboflavin synthase-like beta-barrel	13	118	2.79E-30
PRINTS	PR00406	Cytochrome B5 reductase signature	-	-	165	176	4.2E-9
Pfam	PF00111	2Fe-2S iron-sulfur cluster binding domain	IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	291	360	9.9E-13
Gene3D	G3DSA:3.40.50.80	-	IPR039261	Ferredoxin-NADP reductase (FNR), nucleotide-binding domain	120	257	8.6E-31
SUPERFAMILY	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain	IPR039261	Ferredoxin-NADP reductase (FNR), nucleotide-binding domain	108	251	7.07E-36
Pfam	PF00175	Oxidoreductase NAD-binding domain	IPR001433	Oxidoreductase FAD/NAD(P)-binding	130	235	7.2E-15

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.