Pseudomonas mendocina NK-01, MDS_4494

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0009228 thiamine biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00443
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pmk00730 Thiamine metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
MetaCyc thiazole biosynthesis I (facultative anaerobic bacteria) InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG pmk01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
MetaCyc thiazole biosynthesis II (aerobic bacteria) InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Hamap MF_00443 Thiazole synthase [thiG]. IPR008867 Thiazole synthase 9 264 43.256268
SUPERFAMILY SSF110399 ThiG-like - - 9 250 8.76E-92
Gene3D G3DSA:3.20.20.70 Aldolase class I IPR013785 Aldolase-type TIM barrel 2 264 1.6E-119
Pfam PF05690 Thiazole biosynthesis protein ThiG IPR033983 Thiazole synthase ThiG 12 258 8.3E-114
CDD cd04728 ThiG IPR008867 Thiazole synthase 10 259 0.0
PANTHER PTHR34266 THIAZOLE SYNTHASE IPR008867 Thiazole synthase 2 263 6.5E-113

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.