Pseudomonas mendocina NK-01, MDS_4528

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00072
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pmk02030 Bacterial chemotaxis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pmk02020 Two-component system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 5 116 4.3E-26
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 3 116 8.6E-35
Gene3D G3DSA:3.40.50.2300 - - - 1 121 5.0E-37
PANTHER PTHR44591 STRESS RESPONSE REGULATOR PROTEIN 1 - - 1 120 8.9E-33
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 3 120 3.13E-34
CDD cd17562 REC_CheY4-like - - 3 120 8.25897E-69

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.