Pseudomonas mendocina NK-01, MDS_4535
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0006935 | chemotaxis |
Inferred from Sequence Model
Term mapped from: InterPro:cd16352
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Molecular Function | GO:0050568 | protein-glutamine glutaminase activity |
Inferred from Sequence Model
Term mapped from: InterPro:cd16352
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
|
|
Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| KEGG | pmk02030 | Bacterial chemotaxis | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Gene3D | G3DSA:3.30.1330.200 | - | IPR038592 | CheD-like superfamily | 1 | 110 | 3.1E-26 |
| SUPERFAMILY | SSF64438 | CNF1/YfiH-like putative cysteine hydrolases | IPR011324 | Cytotoxic necrotizing factor-like, catalytic | 1 | 108 | 2.2E-23 |
| PANTHER | PTHR35147 | CHEMORECEPTOR GLUTAMINE DEAMIDASE CHED-RELATED | IPR005659 | Chemoreceptor glutamine deamidase CheD | 1 | 106 | 1.3E-15 |
| Pfam | PF03975 | CheD chemotactic sensory transduction | IPR005659 | Chemoreceptor glutamine deamidase CheD | 1 | 106 | 2.9E-24 |
| CDD | cd16352 | CheD | IPR005659 | Chemoreceptor glutamine deamidase CheD | 1 | 106 | 4.08103E-32 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.