Pseudomonas mendocina NK-01, MDS_4785
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0055085 | transmembrane transport |
Inferred from Sequence Model
Term mapped from: InterPro:PF03547
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
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| Cellular Component | GO:0016020 | membrane |
Inferred from Sequence Model
Term mapped from: InterPro:PF03547
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Pfam | PF03547 | Membrane transport protein | IPR004776 | Membrane transport protein | 154 | 293 | 9.7E-9 |
| Gene3D | G3DSA:1.20.1530.20 | - | IPR038770 | Sodium/solute symporter superfamily | 152 | 301 | 3.7E-11 |
| PANTHER | PTHR36838 | AUXIN EFFLUX CARRIER FAMILY PROTEIN | - | - | 1 | 301 | 2.4E-54 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.