Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Biological Process | GO:0006568 | tryptophan metabolic process |
Inferred from Sequence Model
Term mapped from: InterPro:PF00290
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0004834 | tryptophan synthase activity |
Inferred from Sequence Model
Term mapped from: InterPro:PF00290
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
|
Database | Xref | Pathway | Version | Evidence | PMID |
---|---|---|---|---|---|
KEGG | pst01230 | Biosynthesis of amino acids | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
KEGG | pst01100 | Metabolic pathways | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
KEGG | pst00260 | Glycine, serine and threonine metabolism | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
KEGG | pst01130 | Biosynthesis of antibiotics | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
KEGG | pst01110 | Biosynthesis of secondary metabolites | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
KEGG | pst00400 | Phenylalanine, tyrosine and tryptophan biosynthesis | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
NCBIfam | TIGR00262 | JCVI: tryptophan synthase subunit alpha | IPR002028 | Tryptophan synthase, alpha chain | 8 | 259 | 5.4E-81 |
Gene3D | G3DSA:3.20.20.70 | Aldolase class I | IPR013785 | Aldolase-type TIM barrel | 1 | 269 | 1.3E-102 |
SUPERFAMILY | SSF51366 | Ribulose-phoshate binding barrel | IPR011060 | Ribulose-phosphate binding barrel | 1 | 242 | 1.22E-90 |
CDD | cd04724 | Tryptophan_synthase_alpha | IPR002028 | Tryptophan synthase, alpha chain | 19 | 260 | 4.12973E-118 |
FunFam | G3DSA:3.20.20.70:FF:000037 | Tryptophan synthase alpha chain | - | - | 1 | 266 | 4.7E-97 |
Hamap | MF_00131 | Tryptophan synthase alpha chain [trpA]. | IPR002028 | Tryptophan synthase, alpha chain | 14 | 263 | 36.627117 |
Pfam | PF00290 | Tryptophan synthase alpha chain | IPR002028 | Tryptophan synthase, alpha chain | 8 | 262 | 1.0E-98 |
PANTHER | PTHR43406 | TRYPTOPHAN SYNTHASE, ALPHA CHAIN | IPR002028 | Tryptophan synthase, alpha chain | 3 | 262 | 1.2E-85 |