Pseudomonas syringae pv. tomato DC3000, PSPTO_0178 (fmt)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0004479 methionyl-tRNA formyltransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00460
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003824 catalytic activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF50486
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0071951 conversion of methionyl-tRNA to N-formyl-methionyl-tRNA
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00460
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009058 biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.10.25.10
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pst00670 One carbon pool by folate 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pst00970 Aminoacyl-tRNA biosynthesis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
CDD cd08646 FMT_core_Met-tRNA-FMT_N IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain 5 208 1.10873E-116
Pfam PF02911 Formyl transferase, C-terminal domain IPR005793 Formyl transferase, C-terminal 207 302 5.2E-27
Pfam PF00551 Formyl transferase IPR002376 Formyl transferase, N-terminal 6 183 3.5E-46
FunFam G3DSA:3.40.50.170:FF:000003 Methionyl-tRNA formyltransferase - - 1 209 1.0E-105
CDD cd08704 Met_tRNA_FMT_C IPR044135 Methionyl-tRNA formyltransferase, C-terminal domain 211 294 1.64381E-35
Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. IPR005794 Methionyl-tRNA formyltransferase 5 305 37.136848
NCBIfam TIGR00460 JCVI: methionyl-tRNA formyltransferase IPR005794 Methionyl-tRNA formyltransferase 5 305 5.4E-93
Gene3D G3DSA:3.10.25.10 - IPR037022 Formyl transferase, C-terminal domain superfamily 210 312 9.7E-33
Gene3D G3DSA:3.40.50.170 - - - 1 209 1.6E-76
PANTHER PTHR11138 METHIONYL-TRNA FORMYLTRANSFERASE - - 2 305 1.2E-83
SUPERFAMILY SSF50486 FMT C-terminal domain-like IPR011034 Formyl transferase-like, C-terminal domain superfamily 208 307 6.47E-32
SUPERFAMILY SSF53328 Formyltransferase IPR036477 Formyl transferase, N-terminal domain superfamily 4 207 2.49E-68

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.